RESEARCH

Our research intersects math modelling and machine learning with medicine and physiology to achieve 3 goals: 1) improve patient outcomes; 2) improve clinical operations, and 3) uncover novel physiology. Our projects typically focus on clinical blood tests, and blood cell dynamics - but we are a interested in any situations where computational can realistically help patients. Our goal is not just to contribute to scientific knowledge, but to actually build and deploy tools into the clinic. We believe in collaborative, open, and reproducible science.

Adaptive patient benchmarking

Most blood tests are benchmarked against ‘reference intervals’ derived from healthy populations. These population-level definitions of normality ignore genetic heritability and clinical context. We develop computational approaches to create adaptive benchmarks which are both patient- and context-specific, helping to realize a longstanding goal of personalized medicine.


AI for clinical and anatomic pathology

Pathologists spend so much time on work that isn’t patient-facing. We build tools that can help reduce clinical workload, and lead to more efficient and reproducible workflows. This includes developing computer vision tools for cell analyses, predicting demand for blood product usage, and using large-language models to augment clinical sign-outs.


Modelling biophysics of blood

Blood is a living fluid, whose dynamic properties depend on properties of the cells within it. We use mathematical modelling to simulate the behavior of blood both as a fluid, and as a series of interacting cell populations. Models are used to improve our understanding of various functional processes, such as oxygen delivery, coagulation, and immunity. We use these models in highly applied settings, to capture and predict response to acute inflammation, with an ultimate goal of informating acute care decision making.


Understanding immune dynamics following acute events

Trauma, ischemia, and infection all set off a cascade of inflammatory signaling processes as the body recovers. We use computational tools to better understand how blood cells respond to and influence the inflammatory environment, and how this defines recovery. We collaborative extensively with clinicians and experimentalists to probe the immune system using mathematical models, machine learning, clinical specimen analysis, and mouse models.